SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39061

Signal sequence   MSFSSSNFYVILSISLTVFILLFNINKVNS

Length  30

Organism  Medicago truncatula (Barrel medic) (Medicago tribuloides)

UniProt ID  Q01806,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39061.cif

Structure  SPKB39061.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3399.00504

Aliphatic index  133

Isoelectric point  9.298300651

Charge (pH=7)   0.996838851

Topological polar surface area  1287.67

Aromaticity  0.166666667

Average rotatable bonds  3.7

Number of hydrogen bond donors  45

Number of hydrogen bond acceptors  46

X logP energy  -10.576

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.