SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39040

Signal sequence   MSQIFADRRAAVPARVISFCGAALAVWAGLAVQPAMA

Length  37

Organism  Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)

UniProt ID  Q00879,

Motif  1..37



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39040.cif

Structure  SPKB39040.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3817.54654

Aliphatic index  103.2432432

Isoelectric point  10.43741523

Charge (pH=7)   1.936446134

Topological polar surface area  1458.77

Aromaticity  0.081081081

Average rotatable bonds  3.189189189

Number of hydrogen bond donors  52

Number of hydrogen bond acceptors  49

X logP energy  -12.42089

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.