SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38927

Signal sequence   MHNKILVSSYILLVLLFSLSSFNIVVA

Length  27

Organism  Solanum lycopersicum (Tomato) (Lycopersicon esculentum)

UniProt ID  P93217,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38927.cif

Structure  SPKB38927.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3021.69464

Aliphatic index  176.6666667

Isoelectric point  9.300695891

Charge (pH=7)   1.087747942

Topological polar surface area  1082.18

Aromaticity  0.111111111

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  39

X logP energy  -4.9442

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.