SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38917

Signal sequence   MILVVTLACLIAVVCC

Length  16

Organism  Ruditapes philippinarum (Japanese carpet shell) (Venerupis philippinarum)

UniProt ID  P86986,

Motif  1..16



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38917.cif

Structure  SPKB38917.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1664.21434

Aliphatic index  206.875

Isoelectric point  5.759310256

Charge (pH=7)   -0.187939848

Topological polar surface area  520.05

Aromaticity  0

Average rotatable bonds  3.25

Number of hydrogen bond donors  21

Number of hydrogen bond acceptors  22

X logP energy  -0.5121

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.