SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38890

Signal sequence   MSSRNLLYSSVVLFLVLFYCHG

Length  22

Organism  Magallana gigas (Pacific oyster) (Crassostrea gigas)

UniProt ID  P86789,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38890.cif

Structure  SPKB38890.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2549.04374

Aliphatic index  128.1818182

Isoelectric point  8.51416646

Charge (pH=7)   1.025214535

Topological polar surface area  929.47

Aromaticity  0.181818182

Average rotatable bonds  3.636363636

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  34

X logP energy  -5.45243

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.