SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38834

Signal sequence   MAKQLCSYMFISMFILSAFLALPSAEG

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  P82752,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38834.cif

Structure  SPKB38834.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2970.61094

Aliphatic index  101.4814815

Isoelectric point  6.228791989

Charge (pH=7)   -0.063360742

Topological polar surface area  1018.69

Aromaticity  0.148148148

Average rotatable bonds  3.555555556

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  40

X logP energy  -5.4091

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.