SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38826

Signal sequence   MAKNRVLTIFYCTIYYCICFKYVLLGMVVEKTQG

Length  34

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  P82744,

Motif  1..34



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38826.cif

Structure  SPKB38826.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4012.91854

Aliphatic index  105.8823529

Isoelectric point  8.865652452

Charge (pH=7)   2.809545205

Topological polar surface area  1428.67

Aromaticity  0.176470588

Average rotatable bonds  3.852941176

Number of hydrogen bond donors  54

Number of hydrogen bond acceptors  54

X logP energy  -6.04743

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.