SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38780

Signal sequence   MMKSAILLMVSCVFMFLVVSYIQDVEG

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  P82622,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38780.cif

Structure  SPKB38780.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3054.78784

Aliphatic index  129.6296296

Isoelectric point  4.184373704

Charge (pH=7)   -1.062914258

Topological polar surface area  1044.55

Aromaticity  0.111111111

Average rotatable bonds  3.777777778

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  41

X logP energy  -3.7483

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.