SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38778

Signal sequence   MKYGVLFMVSCGVMFLILSHVEEVEA

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  P82620,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38778.cif

Structure  SPKB38778.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2932.56234

Aliphatic index  119.6153846

Isoelectric point  4.473815116

Charge (pH=7)   -1.968901405

Topological polar surface area  1018.11

Aromaticity  0.115384615

Average rotatable bonds  3.730769231

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  39

X logP energy  -3.438

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.