SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38512

Signal sequence   MTKTVTRAGGASGPQQFQSGGETMKYEITRRRFLAASSAVLAAPAIVTMVRPARA

Length  55

Organism  Sinorhizobium fredii (strain NBRC 101917 / NGR234)

UniProt ID  P55572,

Motif  1..55



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38512.cif

Structure  SPKB38512.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5796.72754

Aliphatic index  67.63636364

Isoelectric point  12.22482707

Charge (pH=7)   6.000074195

Topological polar surface area  2458.19

Aromaticity  0.054545455

Average rotatable bonds  3.454545455

Number of hydrogen bond donors  89

Number of hydrogen bond acceptors  83

X logP energy  -30.42878

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.