SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38502

Signal sequence   VQVVVLALVAQVTLS

Length  15

Organism  Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri)

UniProt ID  P55246,

Motif  <1..15



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38502.cif

Structure  SPKB38502.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1538.89134

Aliphatic index  207.3333333

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  597.36

Aromaticity  0

Average rotatable bonds  3.266666667

Number of hydrogen bond donors  20

Number of hydrogen bond acceptors  20

X logP energy  -3.7963

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.