SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38480

Signal sequence   MKSIISLTAAAAIGVAMFVAPAFAA

Length  25

Organism  Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)

UniProt ID  P54082,

Motif  1..25



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38480.cif

Structure  SPKB38480.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2422.96984

Aliphatic index  121.6

Isoelectric point  9.700002532

Charge (pH=7)   0.997689266

Topological polar surface area  839.64

Aromaticity  0.08

Average rotatable bonds  3

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  32

X logP energy  -5.6674

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.