SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38459

Signal sequence   MAIGFIGSSPDAELSSENSRISSSVLLGCLLCCTDWSAVVPGKTETFRKPFVAIMIKKLKSCFAAYLSDLEQGSMCDMANASPTSLELGLSKLDKES

Length  100

Organism  Human herpesvirus 6B (strain Z29) (HHV-6 variant B) (Human B lymphotropic virus)

UniProt ID  P52461,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38459.cif

Structure  SPKB38459.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  10329.96364

Aliphatic index  88.55670103

Isoelectric point  4.689707575

Charge (pH=7)   -2.301928397

Topological polar surface area  4107.89

Aromaticity  0.06185567

Average rotatable bonds  3.577319588

Number of hydrogen bond donors  148

Number of hydrogen bond acceptors  151

X logP energy  -44.96816

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.