SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38428

Signal sequence   MASINLFLFAFLLLLSHASA

Length  20

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  P50699,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38428.cif

Structure  SPKB38428.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2179.64814

Aliphatic index  156.5

Isoelectric point  7.550323994

Charge (pH=7)   0.08889339

Topological polar surface area  748.68

Aromaticity  0.15

Average rotatable bonds  3.45

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  27

X logP energy  -2.6889

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.