SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38281

Signal sequence   MNNEKNVSFEFIGSTNEVDEIK

Length  22

Organism  Ambrosia psilostachya (Western ragweed) (Ambrosia coronopifolia)

UniProt ID  P43175,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38281.cif

Structure  SPKB38281.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2544.77244

Aliphatic index  61.81818182

Isoelectric point  3.986902615

Charge (pH=7)   -2.995058793

Topological polar surface area  1146.01

Aromaticity  0.090909091

Average rotatable bonds  4.045454545

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  38

X logP energy  -13.0879

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.