SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38254

Signal sequence   MQNRNTYEWAKKMTRLISVLVMIHIITRTSISNA

Length  34

Organism  Pinus thunbergii (Japanese black pine) (Pinus thunbergiana)

UniProt ID  P41619,

Motif  1..34



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Plastid

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38254.cif

Structure  SPKB38254.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4020.78524

Aliphatic index  103.2352941

Isoelectric point  11.57677076

Charge (pH=7)   4.089218097

Topological polar surface area  1677.33

Aromaticity  0.058823529

Average rotatable bonds  4.029411765

Number of hydrogen bond donors  61

Number of hydrogen bond acceptors  57

X logP energy  -15.72699

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.