SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38140

Signal sequence   MKQYIVLACMCLAAAAM

Length  17

Organism  Variola virus (isolate Human/India/Ind3/1967) (VARV) (Smallpox virus)

UniProt ID  P34016,

Motif  1..17



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38140.cif

Structure  SPKB38140.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1831.35624

Aliphatic index  115.2941176

Isoelectric point  8.221165971

Charge (pH=7)   0.872889419

Topological polar surface area  618.26

Aromaticity  0.058823529

Average rotatable bonds  3.529411765

Number of hydrogen bond donors  23

Number of hydrogen bond acceptors  26

X logP energy  -2.4894

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.