SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38137

Signal sequence   MYSLVFVILMCIPFSF

Length  16

Organism  Variola virus (isolate Human/India/Ind3/1967) (VARV) (Smallpox virus)

UniProt ID  P33854,

Motif  1..16



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38137.cif

Structure  SPKB38137.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1910.42094

Aliphatic index  133.75

Isoelectric point  5.919503212

Charge (pH=7)   -0.064840831

Topological polar surface area  551.72

Aromaticity  0.25

Average rotatable bonds  3.5625

Number of hydrogen bond donors  20

Number of hydrogen bond acceptors  23

X logP energy  1.7699

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.