SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38112

Signal sequence   YPGSVDWRQKGAVTPVKDQNPCGSCWAFSTVATVEGINKIVTG

Length  100

Organism  Vasconcellea cundinamarcensis (Mountain papaya) (Carica candamarcensis)

UniProt ID  P32955,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38112.cif

Structure  SPKB38112.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4568.15874

Aliphatic index  65.58139535

Isoelectric point  8.217880591

Charge (pH=7)   0.874964132

Topological polar surface area  1876.79

Aromaticity  0.093023256

Average rotatable bonds  3.302325581

Number of hydrogen bond donors  66

Number of hydrogen bond acceptors  65

X logP energy  -21.73163

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.