SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38111

Signal sequence   IVASIDWRQKGAVTPVRNQGSCGSCWTFSSVAAVEGIIKIRGT

Length  100

Organism  Vasconcellea cundinamarcensis (Mountain papaya) (Carica candamarcensis)

UniProt ID  P32954,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38111.cif

Structure  SPKB38111.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4550.23354

Aliphatic index  88.37209302

Isoelectric point  9.754928767

Charge (pH=7)   2.875656473

Topological polar surface area  1911.76

Aromaticity  0.069767442

Average rotatable bonds  3.441860465

Number of hydrogen bond donors  71

Number of hydrogen bond acceptors  64

X logP energy  -22.53889

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.