SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38080

Signal sequence   MTTMLLLLVVAALANG

Length  16

Organism  Rotavirus B (isolate RVB/Rat/United States/IDIR/1984/G1P[X]) (RV-B) (Rotavirus B (isolate infectious diarrhea of infant rats))

UniProt ID  P30889,

Motif  1..16



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38080.cif

Structure  SPKB38080.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1631.06494

Aliphatic index  176.875

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  583.37

Aromaticity  0

Average rotatable bonds  3.3125

Number of hydrogen bond donors  20

Number of hydrogen bond acceptors  22

X logP energy  -2.9529

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.