SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38037

Signal sequence   MEMVSKIACFVLLCMVVVAPHAE

Length  23

Organism  Solanum lycopersicum (Tomato) (Lycopersicon esculentum)

UniProt ID  P27056,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38037.cif

Structure  SPKB38037.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2521.16594

Aliphatic index  126.9565217

Isoelectric point  5.488098144

Charge (pH=7)   -1.03180083

Topological polar surface area  844.26

Aromaticity  0.043478261

Average rotatable bonds  3.52173913

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  34

X logP energy  -2.7736

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.