SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB38027

Signal sequence   MDTAQVFALFYM

Length  12

Organism  Trypanosoma brucei brucei

UniProt ID  P26327,

Motif  1..12



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB38027.cif

Structure  SPKB38027.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1436.70364

Aliphatic index  73.33333333

Isoelectric point  3.749986963

Charge (pH=7)   -1.002419631

Topological polar surface area  504.27

Aromaticity  0.25

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  17

Number of hydrogen bond acceptors  19

X logP energy  -1.4661

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.