SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB37511

Signal sequence   MINSSRINLNSYFCSIFIVSIVVISLICSEALQIQEAKEPIRGHLTRVTIQNDNDYLLGIHCKSRDDDLGFHILAKGELFGWKFHVNFCYSTLYFCGFSQGQMKKGVFEIYRANRDFYRCANCTWKAEKDGIYGYSEDPVKGYLFYNWLK

Length  100

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  P0DN92,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB37511.cif

Structure  SPKB37511.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  17474.06744

Aliphatic index  85.13333333

Isoelectric point  8.037831279

Charge (pH=7)   1.932317724

Topological polar surface area  6905.74

Aromaticity  0.16

Average rotatable bonds  3.853333333

Number of hydrogen bond donors  248

Number of hydrogen bond acceptors  235

X logP energy  -55.66731

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.