SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB37370

Signal sequence   MRYCAFRLGLFFIGYSCCVLLSTPTLA

Length  27

Organism  Plasmopara viticola (Downy mildew of grapevine) (Botrytis viticola)

UniProt ID  P0CV30,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB37370.cif

Structure  SPKB37370.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3046.71474

Aliphatic index  104.8148148

Isoelectric point  8.503373529

Charge (pH=7)   1.810352701

Topological polar surface area  1056.31

Aromaticity  0.185185185

Average rotatable bonds  3.444444444

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  40

X logP energy  -5.81556

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.