SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB37012

Signal sequence   MFKQVLGGMALMAAFSAPVLA

Length  21

Organism  Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)

UniProt ID  P0A320,

Motif  1..21



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB37012.cif

Structure  SPKB37012.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2153.68714

Aliphatic index  107.1428571

Isoelectric point  9.700002532

Charge (pH=7)   0.997689266

Topological polar surface area  725.87

Aromaticity  0.095238095

Average rotatable bonds  3.285714286

Number of hydrogen bond donors  24

Number of hydrogen bond acceptors  28

X logP energy  -3.4554

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.