SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB36684

Signal sequence   MSQLKNGSSQCLWTSICIVLIVMSMA

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  O64890,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB36684.cif

Structure  SPKB36684.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2844.47154

Aliphatic index  116.1538462

Isoelectric point  8.229691165

Charge (pH=7)   0.873739834

Topological polar surface area  1083.28

Aromaticity  0.038461538

Average rotatable bonds  3.692307692

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  42

X logP energy  -10.5212

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.