SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB36649

Signal sequence   MRNLIISAALVAASLFGMSAQA

Length  22

Organism  Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)

UniProt ID  O52376,

Motif  1..22



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB36649.cif

Structure  SPKB36649.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2235.68794

Aliphatic index  129.0909091

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  883.19

Aromaticity  0.045454545

Average rotatable bonds  3.363636364

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  31

X logP energy  -8.65363

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.