SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB36554

Signal sequence   MAKFASIVALLFAALVVFAAFEAPTVVEA

Length  29

Organism  Raphanus sativus (Radish) (Raphanus raphanistrum var. sativus)

UniProt ID  O24332,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB36554.cif

Structure  SPKB36554.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2997.62914

Aliphatic index  134.8275862

Isoelectric point  4.258147297

Charge (pH=7)   -0.998760489

Topological polar surface area  1010.41

Aromaticity  0.137931034

Average rotatable bonds  3.172413793

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  36

X logP energy  -2.922

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.