SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB36553

Signal sequence   MAKFVSIITLLFVALVLFAAFEAPTMVEA

Length  29

Organism  Raphanus sativus (Radish) (Raphanus raphanistrum var. sativus)

UniProt ID  O24331,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB36553.cif

Structure  SPKB36553.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3143.87664

Aliphatic index  141.3793103

Isoelectric point  4.258147297

Charge (pH=7)   -0.998760489

Topological polar surface area  1030.64

Aromaticity  0.137931034

Average rotatable bonds  3.413793103

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  38

X logP energy  -1.4116

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.