SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB36520

Signal sequence   MNIIKRAGVFIGLVYFTVLLIIYG

Length  24

Organism  Rice yellow stunt virus (RYSV) (Rice transitory yellowing virus)

UniProt ID  O10236,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB36520.cif

Structure  SPKB36520.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2714.39104

Aliphatic index  170.4166667

Isoelectric point  10.00861893

Charge (pH=7)   1.995985126

Topological polar surface area  924.32

Aromaticity  0.166666667

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  32

X logP energy  -0.41683

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.