SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB36329

Signal sequence   MDIPKQYLSLFILIIFITTKLSQA

Length  24

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  F4JLQ5,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB36329.cif

Structure  SPKB36329.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2797.43194

Aliphatic index  150.4166667

Isoelectric point  9.256043355

Charge (pH=7)   0.996990302

Topological polar surface area  1000.5

Aromaticity  0.125

Average rotatable bonds  3.875

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  36

X logP energy  -3.3136

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.