SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB36325

Signal sequence   MSLIPITFYFLFLFFSNFRGVFA

Length  23

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  F4J8G2,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB36325.cif

Structure  SPKB36325.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2778.34984

Aliphatic index  101.7391304

Isoelectric point  9.348807885

Charge (pH=7)   0.997130574

Topological polar surface area  880.64

Aromaticity  0.347826087

Average rotatable bonds  3.608695652

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  31

X logP energy  0.01227

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.