SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB36012

Signal sequence   MKQNIKLGVIAALMLIVLTPVTSNA

Length  25

Organism  Clostridioides difficile (strain R20291) (Peptoclostridium difficile)

UniProt ID  C9YID6,

Motif  1..25



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB36012.cif

Structure  SPKB36012.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2639.29394

Aliphatic index  156

Isoelectric point  10.80537956

Charge (pH=7)   1.997394232

Topological polar surface area  994.93

Aromaticity  0

Average rotatable bonds  3.56

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  36

X logP energy  -6.9441

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.