SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB36007

Signal sequence   MNYEAEQPGANDDASGVAVALELARVLA

Length  28

Organism  Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) (Verticillium wilt of alfalfa) (Verticillium albo-atrum)

UniProt ID  C9SPU8,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB36007.cif

Structure  SPKB36007.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2875.15964

Aliphatic index  97.85714286

Isoelectric point  3.638402189

Charge (pH=7)   -3.99665109

Topological polar surface area  1258.36

Aromaticity  0.035714286

Average rotatable bonds  3.321428571

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  41

X logP energy  -13.98043

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.