SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB35958

Signal sequence   MLDNKFGFKQRVASLRWLSAAIMLSVSAVPAWA

Length  33

Organism  Pectobacterium carotovorum subsp. carotovorum (strain PC1)

UniProt ID  C6DKV3,

Motif  1..33



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB35958.cif

Structure  SPKB35958.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3665.37534

Aliphatic index  103.6363636

Isoelectric point  11.65088966

Charge (pH=7)   2.997834093

Topological polar surface area  1397.55

Aromaticity  0.121212121

Average rotatable bonds  3.575757576

Number of hydrogen bond donors  50

Number of hydrogen bond acceptors  47

X logP energy  -9.82366

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.