SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB35956

Signal sequence   MPTNTVRCLRLLPLASVLLAA

Length  21

Organism  Pectobacterium carotovorum subsp. carotovorum (strain PC1)

UniProt ID  C6DHY3,

Motif  1..21



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB35956.cif

Structure  SPKB35956.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2252.80524

Aliphatic index  153.3333333

Isoelectric point  10.52640717

Charge (pH=7)   1.936002961

Topological polar surface area  855.32

Aromaticity  0

Average rotatable bonds  3.333333333

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  30

X logP energy  -6.40626

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.