SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB35954

Signal sequence   MIGILNRWRQFGRRYFWPHLLLGMVAASLGLPTSLN

Length  36

Organism  Pectobacterium carotovorum subsp. carotovorum (strain PC1)

UniProt ID  C6DET5,

Motif  1..36



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB35954.cif

Structure  SPKB35954.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4186.01274

Aliphatic index  111.1111111

Isoelectric point  12.50177001

Charge (pH=7)   4.088029731

Topological polar surface area  1582.29

Aromaticity  0.138888889

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  57

Number of hydrogen bond acceptors  51

X logP energy  -9.19652

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.