SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB35952

Signal sequence   MIVRFLCWLTGLLLCTAAYA

Length  20

Organism  Pectobacterium carotovorum subsp. carotovorum (strain PC1)

UniProt ID  C6DC28,

Motif  1..20



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB35952.cif

Structure  SPKB35952.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2258.82624

Aliphatic index  146.5

Isoelectric point  8.222829177

Charge (pH=7)   0.873181142

Topological polar surface area  754.6

Aromaticity  0.15

Average rotatable bonds  3.45

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  28

X logP energy  -1.21423

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.