SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB35950

Signal sequence   MNAKRIRGLLIFAAVIAIAVLIWRHFTQTSPA

Length  32

Organism  Pectobacterium carotovorum subsp. carotovorum (strain PC1)

UniProt ID  C6DBC6,

Motif  1..32



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB35950.cif

Structure  SPKB35950.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3579.35664

Aliphatic index  134.375

Isoelectric point  12.80742811

Charge (pH=7)   4.088588423

Topological polar surface area  1359.69

Aromaticity  0.09375

Average rotatable bonds  3.59375

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  44

X logP energy  -7.89319

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.