SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB35587

Signal sequence   MSRLRTSHALRTAAALVAVGCLASG

Length  25

Organism  Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) (Oligotropha carboxidovorans)

UniProt ID  B6JBH5,

Motif  1..25



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB35587.cif

Structure  SPKB35587.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2512.97444

Aliphatic index  109.6

Isoelectric point  12.19926532

Charge (pH=7)   3.02690874

Topological polar surface area  1077.25

Aromaticity  0

Average rotatable bonds  3.28

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  37

X logP energy  -13.91089

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.