SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB35277

Signal sequence   MSGSLAFHIIMSVTFMVFFFGGLCEA

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  B3H7A6,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB35277.cif

Structure  SPKB35277.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2843.42724

Aliphatic index  90

Isoelectric point  5.36107726

Charge (pH=7)   -0.971306203

Topological polar surface area  937.72

Aromaticity  0.192307692

Average rotatable bonds  3.461538462

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  37

X logP energy  -4.4604

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.