SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB35274

Signal sequence   MNCFSYFFLVIILCAGLNNA

Length  20

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  B3H6H8,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB35274.cif

Structure  SPKB35274.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2253.71994

Aliphatic index  122

Isoelectric point  5.824052577

Charge (pH=7)   -0.126815547

Topological polar surface area  785.95

Aromaticity  0.2

Average rotatable bonds  3.5

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  29

X logP energy  -3.9252

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.