SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB35250

Signal sequence   MRRVTRTIAAAGAAIA

Length  16

Organism  Bifidobacterium longum (strain DJO10A)

UniProt ID  B3DPP6,

Motif  1..16



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB35250.cif

Structure  SPKB35250.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1628.95664

Aliphatic index  104.375

Isoelectric point  12.801071

Charge (pH=7)   2.997974365

Topological polar surface area  725.98

Aromaticity  0

Average rotatable bonds  3.3125

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  23

X logP energy  -8.52619

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.