SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB35135

Signal sequence   MFDLRTKVMIGIASTLLIAAIVLITVVFC

Length  29

Organism  Rattus norvegicus (Rat)

UniProt ID  B1WBS9,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB35135.cif

Structure  SPKB35135.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3152.98944

Aliphatic index  171.3793103

Isoelectric point  8.545113874

Charge (pH=7)   0.936157722

Topological polar surface area  1084.26

Aromaticity  0.068965517

Average rotatable bonds  3.586206897

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  40

X logP energy  -3.37423

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.