SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB34899

Signal sequence   MCCYLFQQRERERKGTLLTGEAYKLCETITLLDVLQIEQDIPPIGNSDDNSDDVAKSRKVRNSCMCPPGPPGERGPVGPPGLPGLPAPYYRRPRVPLSNVVFVVVIVIVFFKFQNLDESISRKMRAFGMLYSPDGQAIQLRGMPGPPGPAGPKGLRGYPGFPGPIGLDGPRGLPGTPGSKGERGERGPVGPPGFPGPKGDRGVMTGPFGVHGQHPAPSGPIGHHTTMNIGPPGPPGPPGPPGPAGRDGRHGMKGDRGLPGFDGESKIGPKGETGNPGRDGIPGARGPPGERGEKGDTAFLSTYPRGQSVSTVSSSGSQGPPGPPGPPGVCQVSQCIGVQGPPGIPGEPGRTIIGPQGPPGEKGERGERGETGDKGPPGTPGAASLLNGGKALVGPPGPPGRDGRPGEKGEKGEHGLRGDMGLPGPEGTPGKRGRRGRHGISLVAPNGTINEDLKKLLKTELMPLLIEDISELRGKNVIPGPPGPPGPRGHHGPIGPAGERGPQGLPGHSGERGERGDIGPPGLPGQPGAAESSGNQSGPRGPPGLPGPPGEKGDLGPPGLPGQPGALGLPGHPGPMGLRGPHGTEGKQGKQGPEGPKGYPGPMGPQGPPGNDGEPGIDGRPGPAGEKGDQGIPGLDAPCPTGPDGLPLPYCSWKPMDGKNDVWERRKRATLPRSESVPEERTYIKN

Length  100

Organism  Caenorhabditis briggsae

UniProt ID  A8WR59,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB34899.cif

Structure  SPKB34899.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  69736.65164

Aliphatic index  53.42565598

Isoelectric point  9.304915286

Charge (pH=7)   11.59519792

Topological polar surface area  28389.3

Aromaticity  0.033527697

Average rotatable bonds  1.457725948

Number of hydrogen bond donors  925

Number of hydrogen bond acceptors  966

X logP energy  -681.58141

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.