SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB34882

Signal sequence   MVAYEKSPIVFLFATMMLVMFLFCGSGEA

Length  29

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  A8MRM1,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB34882.cif

Structure  SPKB34882.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3233.96574

Aliphatic index  94.13793103

Isoelectric point  4.25810691

Charge (pH=7)   -1.061585619

Topological polar surface area  1050.87

Aromaticity  0.172413793

Average rotatable bonds  3.551724138

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  42

X logP energy  -2.9609

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.