SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB34876

Signal sequence   MSSSQFFILCIILISSFPLHEC

Length  22

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  A8MR88,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB34876.cif

Structure  SPKB34876.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2516.02604

Aliphatic index  124.0909091

Isoelectric point  5.358674626

Charge (pH=7)   -1.033280919

Topological polar surface area  875.85

Aromaticity  0.136363636

Average rotatable bonds  3.636363636

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  34

X logP energy  -5.1936

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.