SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB34873

Signal sequence   MSSSRFLILCIILISFFPLHEC

Length  22

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  A8MQY8,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB34873.cif

Structure  SPKB34873.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2570.16404

Aliphatic index  141.8181818

Isoelectric point  7.254272257

Charge (pH=7)   -0.03328423

Topological polar surface area  874.43

Aromaticity  0.136363636

Average rotatable bonds  3.727272727

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  33

X logP energy  -3.14203

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.