SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB34840

Signal sequence   MNNLSYLTKIPLIWVLLSVTLLSA

Length  24

Organism  Shewanella sediminis (strain HAW-EB3)

UniProt ID  A8FYZ2,

Motif  1..24



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB34840.cif

Structure  SPKB34840.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2703.31884

Aliphatic index  174.5833333

Isoelectric point  9.298300651

Charge (pH=7)   0.996838851

Topological polar surface area  973.2

Aromaticity  0.083333333

Average rotatable bonds  3.583333333

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  35

X logP energy  -4.1546

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.